Processing Metabolomics and Proteomics Data with Open Software: A Practical Guide (New Developments in Mass Spectrometry, Volume 8)

Robert Winkler, Magnus Palmblad, Hannes Roest, Tomas Pluskal, David Wishart, Alberto Gil de la Fuente, Bo Wen, Eric Deutsch, Cheng Chang, and Yasset Perez-Riverol

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Metabolomics and proteomics allow deep insights into the chemistry and physiology of biological systems. This book expounds open-source programs, platforms and programming tools for analysing metabolomics and proteomics mass spectrometry data. In contrast to commercial software, open-source software is created by the academic community, which facilitates the direct interaction between users and developers and accelerates the implementation of new concepts and ideas. The first section of the book covers the basics of mass spectrometry, experimental strategies, data operations, the open-source philosophy, metabolomics, proteomics and statistics/ data mining. In the second section, active programmers and users describe available software packages. Included tutorials, datasets and code examples can be used for training and for building custom workflows. Finally, every reader is invited to participate in the open science movement.

  • ISBN10 1788019903
  • ISBN13 9781788019903
  • Publish Date 16 March 2020
  • Publish Status Active
  • Publish Country GB
  • Imprint Royal Society of Chemistry
  • Format eBook (EPUB)
  • Pages 430
  • Language English